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Programme
Semaine
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Liste
Lun. 20
Mar. 21
Mer. 22
Jeu. 23
Ven. 24
Sam. 25
Dim. 26
Lun. 27
Mar. 28
Mer. 29
Jeu. 30
Ven. 31
07:00
08:00
09:00
10:00
11:00
12:00
13:00
14:00
15:00
16:00
17:00
18:00
19:00
20:00
21:00
Arrivée
14:00 - 18:45 (4h45)
Arrivée
Arrivée
Dîner
19:30 - 21:00 (1h30)
Dîner
Petit déjeuner
7:45 - 8:30 (45min)
Petit déjeuner
Introduction
8:30 - 8:45 (15min)
Introduction
Lavery 1 - DNA fine structure and conformation flexibility
8:45 - 10:15 (1h30)
Lavery 1 - DNA fine structure and conformation flexibility
Pause café
10:15 - 10:45 (30min)
Pause café
Schiessel 1 - DNA as a wormlike chain (Euler elastica, Kirchhoff analogy, stretching DNA under an external force)
10:45 - 12:15 (1h30)
Schiessel 1 - DNA as a wormlike chain (Euler elastica, Kirchhoff analogy, stretching DNA under an external force)
Déjeuner
12:15 - 14:00 (1h45)
Déjeuner
Lavery 2 - All-atom molecular simulation techniques for nucleic acids
17:15 - 18:45 (1h30)
Lavery 2 - All-atom molecular simulation techniques for nucleic acids
Dîner
19:30 - 21:00 (1h30)
Dîner
Petit déjeuner
7:45 - 8:45 (1h)
Petit déjeuner
Schiessel 2 - Nucleosome as a DNA spool (nucleosome breathing and force-induced unwrapping)
8:45 - 10:15 (1h30)
Schiessel 2 - Nucleosome as a DNA spool (nucleosome breathing and force-induced unwrapping)
Pause café
10:15 - 10:45 (30min)
Pause café
Lavery 3 - Modeling DNA structure and dynamics
10:45 - 12:15 (1h30)
Lavery 3 - Modeling DNA structure and dynamics
Déjeuner
12:15 - 14:00 (1h45)
Déjeuner
Travaux pratiques
14:00 - 16:00 (2h)
Travaux pratiques
de Pablo 1 - Coarse grain models of DNA, and the role of hydrodynamic interactions in dynamics
17:15 - 18:45 (1h30)
de Pablo 1 - Coarse grain models of DNA, and the role of hydrodynamic interactions in dynamics
Dîner
19:30 - 21:00 (1h30)
Dîner
Petit déjeuner
7:45 - 8:45 (1h)
Petit déjeuner
Lavery 4 - Modeling DNA-ligand and DNA-protein interactions
8:45 - 10:15 (1h30)
Lavery 4 - Modeling DNA-ligand and DNA-protein interactions
Pause café
10:15 - 10:45 (30min)
Pause café
de Pablo 2 - Atomistic and mesoscale models of DNA, their advantages and limitations
10:45 - 12:15 (1h30)
de Pablo 2 - Atomistic and mesoscale models of DNA, their advantages and limitations
Déjeuner
12:15 - 14:00 (1h45)
Déjeuner
Travaux pratiques
14:00 - 16:00 (2h)
Travaux pratiques
Schiessel 3 - Chromatin fiber as a problem in geometry (two-angle model, multi-ribbon model)
17:15 - 18:45 (1h30)
Schiessel 3 - Chromatin fiber as a problem in geometry (two-angle model, multi-ribbon model)
Dîner
19:30 - 21:00 (1h30)
Dîner
Petit déjeuner
7:45 - 8:45 (1h)
Petit déjeuner
de Pablo 3 - Coarse-grained models of DNA-histone interactions, and relevance for the study of chromatin
8:45 - 10:15 (1h30)
de Pablo 3 - Coarse-grained models of DNA-histone interactions, and relevance for the study of chromatin
Pause café
10:15 - 10:45 (30min)
Pause café
Weigt 1 - Regulatory DNA motifs I: From the biophysics of protein-DNA interaction to the bioinformatics of transcription factor binding sites
10:45 - 12:15 (1h30)
Weigt 1 - Regulatory DNA motifs I: From the biophysics of protein-DNA interaction to the bioinformatics of transcription factor binding sites
Déjeuner
12:15 - 14:00 (1h45)
Déjeuner
Travaux pratiques
14:00 - 16:00 (2h)
Travaux pratiques
Séminaire : Everaers - Universal Aspects of Chromosome Folding
17:15 - 18:45 (1h30)
Séminaire : Everaers - Universal Aspects of Chromosome Folding
Dîner
19:30 - 21:00 (1h30)
Dîner
Petit déjeuner
7:45 - 8:45 (1h)
Petit déjeuner
Weigt 2 - How similar are two biological sequences: Algorithms for sequence alignment
8:45 - 10:15 (1h30)
Weigt 2 - How similar are two biological sequences: Algorithms for sequence alignment
Pause café
10:15 - 10:45 (30min)
Pause café
Arneodo 1 - Long-range correlations in eukaryotic DNA: a footprint of nucleosome packaging
10:45 - 12:15 (1h30)
Arneodo 1 - Long-range correlations in eukaryotic DNA: a footprint of nucleosome packaging
Déjeuner
12:15 - 14:00 (1h45)
Déjeuner
Dîner
19:30 - 21:00 (1h30)
Dîner
Petit déjeuner
7:45 - 8:45 (1h)
Petit déjeuner
Déjeuner
12:15 - 14:00 (1h45)
Déjeuner
Dîner
19:30 - 21:00 (1h30)
Dîner
Petit déjeuner
7:45 - 8:45 (1h)
Petit déjeuner
Schiessel 4 - Chromosome as a fractal globule (internal distances, contact probabilities, molten vs. fractal globule)
8:45 - 10:15 (1h30)
Schiessel 4 - Chromosome as a fractal globule (internal distances, contact probabilities, molten vs. fractal globule)
Pause café
10:15 - 10:45 (30min)
Pause café
Weigt 3 - Regulatory DNA motifs II: Using phylogeny for motif inference
10:45 - 12:15 (1h30)
Weigt 3 - Regulatory DNA motifs II: Using phylogeny for motif inference
Déjeuner
12:15 - 14:00 (1h45)
Déjeuner
Travaux pratiques
14:00 - 16:00 (2h)
Travaux pratiques
ten Wolde 1 - Overview of noise in biochemical networks
17:15 - 18:45 (1h30)
ten Wolde 1 - Overview of noise in biochemical networks
Dîner
19:30 - 21:00 (1h30)
Dîner
Petit déjeuner
7:45 - 8:45 (1h)
Petit déjeuner
ten Wolde 2 - Modeling biochemical networks
8:45 - 10:15 (1h30)
ten Wolde 2 - Modeling biochemical networks
Pause café
10:15 - 10:45 (30min)
Pause café
Arneodo 2 - DNA sequence effect on the nucleosomal organization of the eukaryotic chromatin fiber
10:45 - 12:15 (1h30)
Arneodo 2 - DNA sequence effect on the nucleosomal organization of the eukaryotic chromatin fiber
Déjeuner
12:15 - 14:00 (1h45)
Déjeuner
Weigt 4 - Co-evolution in proteins: From maximum-entropy modeling of protein families to 3D protein structure prediction
17:15 - 18:45 (1h30)
Weigt 4 - Co-evolution in proteins: From maximum-entropy modeling of protein families to 3D protein structure prediction
Dîner
19:30 - 21:00 (1h30)
Dîner
Petit déjeuner
7:45 - 8:45 (1h)
Petit déjeuner
Arneodo 3 - Large-scale analysis of genomic sequences: from the detection of replication origins to the modeling of replication in higher eukaryotes
8:45 - 10:15 (1h30)
Arneodo 3 - Large-scale analysis of genomic sequences: from the detection of replication origins to the modeling of replication in higher eukaryotes
Pause café
10:15 - 10:45 (30min)
Pause café
ten Wolde 3 - Simulating biochemical networks
10:45 - 12:15 (1h30)
ten Wolde 3 - Simulating biochemical networks
Déjeuner
12:15 - 14:00 (1h45)
Déjeuner
Travaux pratiques
14:00 - 16:00 (2h)
Travaux pratiques
Séminaire : Rivoire - Synteny in bacterial genomes
17:15 - 18:45 (1h30)
Séminaire : Rivoire - Synteny in bacterial genomes
Dîner
19:30 - 21:00 (1h30)
Dîner
Petit déjeuner
7:45 - 8:45 (1h)
Petit déjeuner
ten Wolde 4 - Quantifying information transmission in biochemical networks using measures from information theory
8:45 - 10:15 (1h30)
ten Wolde 4 - Quantifying information transmission in biochemical networks using measures from information theory
Pause café
10:15 - 10:45 (30min)
Pause café
Arneodo 4 - Spatio-temporal organization of replication: On genome evolution and large-scale chromatin folding
10:45 - 12:15 (1h30)
Arneodo 4 - Spatio-temporal organization of replication: On genome evolution and large-scale chromatin folding
Déjeuner
12:15 - 14:00 (1h45)
Déjeuner
Travaux pratiques
14:00 - 16:00 (2h)
Travaux pratiques
Présentations des participants
17:15 - 18:45 (1h30)
Présentations des participants
Dîner
19:30 - 21:00 (1h30)
Dîner
Petit déjeuner
7:45 - 8:45 (1h)
Petit déjeuner
Présentations des participants
8:45 - 10:15 (1h30)
Présentations des participants
Pause
10:15 - 10:45 (30min)
Pause
Présentations des participants
10:45 - 12:15 (1h30)
Présentations des participants
Déjeuner
12:15 - 14:00 (1h45)
Déjeuner
Départ
14:00 - 18:45 (4h45)
Départ
Départ
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